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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901681.1_cds_XP_016451734.1_46049
CDS Infomation

[gene=LOC107776357] [db_xref=GeneID:107776357] [protein=multisubstrate pseudouridine synthase 7-like] [protein_id=XP_016451734.1] [location=join(53039..53259,54084..54165,54248..54445,54539..54753,55467..55539,55794..55850,57090..57169,57280..57342,57513..57600,58251..58353,58522..58625,59028..59101,59949..60013,60133..60305,61372..61439,61520..61580,62378..62415,64696..64764,65308..65653,65811..65840)] [gbkey=CDS]
Sequence

ATGCTAAAAACCCTTTGTTCCAAACTCCGGAGTCATCATCAGCTACTAACAAAAACCCTG
CAACAAGTTCTTGGTCACCCTAAAATTCTAATACCCTACTACAGCTTTCTTGATCAGAAT
CTTTTGCCTGTTACCATGATGAAAACAATGGATGAATCCGATGTGGGCATCTCCTGCTAC
ATTTCCAAGCTCCCTGGCTTTCGTGGCATACTCAAACAAAGGTACTCTGACTTCATTGTA
AATGAAGTGGACTTAGATGGAAATGTTGTTCATTTGACTTCATTGGAGGCTCCAGCGGAG
GTGTGTTCAGAGGACAAGGACGTAAATTTATCTGATCAACTGAACAAAAGTTATGCGACT
GAGATAGAATCTTTCAGATCTCTCGCTGGCAATTCTGATGCTGACAAGCTTAAGGGTCTT
ATTGATAAACTTAATTCTGGAGTCGATGTCAGTGATGAATCCGTCGTCCTTTCACCAAGT
TCAGATAAATTGCATCGTACTGCAATTCATAATTTTTTCAAGGAAAGATTAAAATTCCTT
GTAACAGATGCTGTTGATGGACCGGAGGACTCATCAAAGTGTGTTCGTGTGAGATTGAAT
AAGGGAGGGAATAATGGGAGGGGTAGATTCTCTAGGAAAAGGAAAGACCGAAATGATAAA
CCTTATGACAGTAGAGGTTCAGACAGTTGGCCAGAACATCTTGGCAAGTTCCTTAGGTTT
CATCTTTTCAAGGAGAACAAGGATACACAGGAAGCTTTAAACATTATAGCAAAGATGCTC
GGCGTTCAGCCTAGGTCCTTTGGATTTGCTGGTACTAAAGACAAGCGTGCTGTATCAACC
CAGAGGGTTACTGTTTTCAAGCAACGAGCAAGTAGAGTAGCAGCTCTCAACGAAAGATTG
ATTGGAATCAAAGTTGGTGACTTTTGCCATGTTAAAGAAGGGCTTCTGCTTGGGCAGCTT
TATGGGAACCGATTTACTATAACACTTCGGGGAGTGTCAGCAGATTCTGAGGATATAATT
AAAGCATCAGCAGTTGCCCTAGGAGAGCATGGATTTATAAACTATTTTGGTTTACAGCGG
TTTGGCAGCAGTTCTGTGCCAACCCATCTGATTGGAGCTGCGTTATTGCGTGGAGAGTGG
AAAGCTGCTGTCAGCTTGATTCTTGATCCAAGAGAAGGGGAGAAGAATGCCATCAGTACA
GTAAGGGAGTATTACAAGGAAAGTGGTGACATTGATGGGACCCTAAGGCAGTTACCTCGA
CATCTGGTTGCTGAAAGGGCGATTTTGCAGTGCCTGAAAAAATCTCCTGGAAACTGTCTA
CAAGCTCTGAAGGGGATACCCAGGACTCTCCGAATGATGTATGTACATAGCTATCAAAGT
TATCTTTGGAACCATGCAGCAAGCATGAGAGTGCAAAAACATGGGTTTGACCAAGTTGTG
TTGGGAGATCTGGTTTATTCAAAGGAACAACCTAAAGAGAAAGAAACTTTTGTTGCTGAA
TGTGAAGACGTGAATGGCAACGACATGGATGATTATAGTAATCTGGATGAGACCTCAGAG
ACTGATCTTCCTGAAGAAAAAAATATATCAGTCAAGGCTATAAATGAAGAAGACCTTATA
TCCGGTACATATACCATCGAAGATGTACTTCTACCTTTGCCTGGATCTAGAGTTATTTAT
CCGTCAAATGACATTGGGGAAGTTTACTGTGACTTGGCACAGAAGGATGGTATCAGCTTG
ACAGAGACTGCGCATAAGATCAAGGAATTCTCCATAACTAATATGACCGGAGCTTACAGA
CGTGTATTTCAAAAGCCGAAGGATTTTGAATGGGAATTGCTTAGTTACACTGATGGAACT
ATACCTCTAGGGGAGACAGATTTTGATGCCATTGCCAAGTCAGTAAAGAAAAGCAAGGTC
AGAGAGGAGAAGTCGACCAATGGAAGCGAGGAACTTGCTGCTGACTATGGTACATCTTCA
GCAATATCTGAAGGTGGTGACATGCTTCCAGGAAAAGGTTGTGAGGAAAAGATTAACAGT
GAAGCGATGCAATCAGAGGAATCTCCTAGTGGTGGTAATGCTCAGGAGAGCCAGATGGCT
CTCAAGCTGAGCTTTACACTACCAGCTTCTTGCTATGCAACTATGGCTGTGAGGGAGCTG
CTGAAAACATCCACTTCTGTTGCATTTCACAAGTCTCTAAATGACTAA

Peptide Sequence

PEP ID

XP_016451734.1
PEP Infomation

PREDICTED: multisubstrate pseudouridine synthase 7-like [Nicotiana tabacum]
Sequence

MLKTLCSKLRSHHQLLTKTLQQVLGHPKILIPYYSFLDQNLLPVTMMKTMDESDVGISCY
ISKLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLEAPAEVCSEDKDVNLSDQLNKSYAT
EIESFRSLAGNSDADKLKGLIDKLNSGVDVSDESVVLSPSSDKLHRTAIHNFFKERLKFL
VTDAVDGPEDSSKCVRVRLNKGGNNGRGRFSRKRKDRNDKPYDSRGSDSWPEHLGKFLRF
HLFKENKDTQEALNIIAKMLGVQPRSFGFAGTKDKRAVSTQRVTVFKQRASRVAALNERL
IGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSADSEDIIKASAVALGEHGFINYFGLQR
FGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPR
HLVAERAILQCLKKSPGNCLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVV
LGDLVYSKEQPKEKETFVAECEDVNGNDMDDYSNLDETSETDLPEEKNISVKAINEEDLI
SGTYTIEDVLLPLPGSRVIYPSNDIGEVYCDLAQKDGISLTETAHKIKEFSITNMTGAYR
RVFQKPKDFEWELLSYTDGTIPLGETDFDAIAKSVKKSKVREEKSTNGSEELAADYGTSS
AISEGGDMLPGKGCEEKINSEAMQSEESPSGGNAQESQMALKLSFTLPASCYATMAVREL
LKTSTSVAFHKSLND

Transcript Sequence

Gene sequence data has not been registered.